Browse of TCMCG017C13458 protein

CDS

Accession Number	TCMCG017C13458
gbkey	CDS
Protein Id	OMO96337.1
Location	complement(join(80729..81491,81833..82920,83015..84033,84133..85132,85244..85418,86124..86221,86745..87809,88881..89090))
Organism	Corchorus olitorius
locus_tag	COLO4_15351

Protein

Length	1805aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215141, BioSample:SAMN03160584
db_source	AWUE01015661.1
Definition	hypothetical protein COLO4_15351 [Corchorus olitorius]
Locus_tag	COLO4_15351

EGGNOG-MAPPER Annotation

COG_category	K
Description	mediator of RNA polymerase II transcription subunit
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15156        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0000428        [VIEW IN EMBL-EBI] GO:0002376        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005667        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006950        [VIEW IN EMBL-EBI] GO:0006952        [VIEW IN EMBL-EBI] GO:0006955        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008284        [VIEW IN EMBL-EBI] GO:0009266        [VIEW IN EMBL-EBI] GO:0009409        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0009605        [VIEW IN EMBL-EBI] GO:0009607        [VIEW IN EMBL-EBI] GO:0009627        [VIEW IN EMBL-EBI] GO:0009628        [VIEW IN EMBL-EBI] GO:0009631        [VIEW IN EMBL-EBI] GO:0009814        [VIEW IN EMBL-EBI] GO:0016591        [VIEW IN EMBL-EBI] GO:0016592        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0030880        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0042127        [VIEW IN EMBL-EBI] GO:0043207        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044451        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0044798        [VIEW IN EMBL-EBI] GO:0045087        [VIEW IN EMBL-EBI] GO:0048518        [VIEW IN EMBL-EBI] GO:0048522        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051704        [VIEW IN EMBL-EBI] GO:0051707        [VIEW IN EMBL-EBI] GO:0055029        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0061695        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0070847        [VIEW IN EMBL-EBI] GO:0090575        [VIEW IN EMBL-EBI] GO:0098542        [VIEW IN EMBL-EBI] GO:1902494        [VIEW IN EMBL-EBI] GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCTGAGTTGGGGCAGCAAACGGTGGAGTTCTCGACTTTAGTTAGTCGAACTGCCGAGGAATCTTTCTTGTCATTGAAAGAACTCGTTGAGAAATCGAAATCAAGCGACCAATCGGATACTGAGAAGAAGATTAATCTCCTTAAGTATATAGTCAAAACTCAGCAACGCATGCTTAGGCTTAATGTTCTTGCTAAGTGGTGTCAGCAGGTTCCACTGATACAGTATTGTCAGCAATTGACATCAACTTTATCAAGTCATGATACATGTTTCACTCAGGCTGCAGACTCATTATTCTTCATGCATGAGGGGCTACAGCAAGCTCGTGCCCCTGTCTATGATGTTCCATCTGCTGTTGAAGTTCTACTCACTGGATCATATGAGCGTTTACCAAAATGTATTGAAGATGTGGGTATGCAAAGCTCATTAAACGAAGATCAGCAGAAGCCAGCTTTGAGAAAGTTGGACACGCTTGTAAGGTCTAAATTACTCGAAGTTTCAATGCCCAAGGAAATAACTGAAGTGAAAGTTTCCAATGGTACAGCTTTGCTTCGGGTTGATGGGGAATTTAAGGTGTTAGTTACTCTGGGTTATCGTGGACACTTATCATTGTGGAGGATTTTACATTTAGAATTACTTGTTGGTGAGAGAAGTGGACTTGTGAAACTAGAGGAGATGAGAAGGCATGTTCTTGGAGATGACTTAGAACGCAGAATGTCTGCAGCAGAGAATCCATTCAATATTTTATACTCAGTTCTACATGAGCTTTGTGTTGCACTTGTTATGGATACTGTGATAAGACAAGTACAGGCACTTCGGCAAGGGAGATGGAAAGATGCCATTCGCTTTGAGCTTATATCTGATGGAGGAAGTGGTAGTTCCACACAAGTGAATCAAGATAATGAATCTGATTCAGCTGGTCTACGAACTCCTGGGTTGAAACTTGTCTATTGGTTAGACTTTGATAAAAACTCGGGCCCTTCAGACTCAGGATCTTGTCCATATATAAAAATCGAACCTGGACCAGACCTGCAGATTAAGTGTCATCATAGCACATTTCTTATAGACCCATTAACTGGGAAAGAGGCGAGGTTCTCCCTTGACCAAAGTTGTATTGATGTTGAAAAGCTTCTATTAAGAGCTATATCATGCCATAAATACACTCGTCTGCTAGAAATTCAGAAAGAGCTAGTGAAAAATGTGCAGATTTGCCGAGCTGCCAGTGATGTTGTTCTCCACTCACCAGCTGATGACTCTGATAGTGAGAATAAGAAGAAGGATGCTAAGCTTGACAATAAGGAGCATGAGGGGCAGGAAGTATTACGTGTCCGTGCTTATGGTTCTTCTTTTTTTACACTTGGAATAAACATAAGGAATGGCCGCTTCCTTCTCCAGTCATCCCAGAATATACTTGCACCTTCAGCATTATTAGAATGTGAGGAAGCTTTAAATCAAGAAACTATGAATGCAGTTGAGGTTTTCACAAGCCTGCGTAACAAAAGTGTATTACATCTATTTGCTGCTATTGGCAGATTTTTAGGCCTCGAAGTCTATGAACATGGTTTTGCTGCAATGAAAGTGCCTAAGAACATTGTCAGTGGCTCTGCTGTATTGGTATTGGGGTTTCCAGATTGCGAGAGTTCTTATTTTCTGCTGATGGAACTTGATAAGGATTTTAAGCCTTTGTTCAAGCTGCTAGAGACTGAGCCAGATCCATCTGGAAAGGGGCAGTCATTTTATGACTTAAATAATGTGTTGCGCATCAAGAAAATTGACATTAACCAGATGCAGATGCTTGAAGATGAAACAAATTTGAGCATAGTTGACTGGGGGAAGTTACTTACGTTTTTACCTAATATCGTGGGTCCAAATCAGACCTCTGAACATGGCCTCCTTTCTGAATTCAACCTTGATGGTTCTATGCAGATTGCTGGGGGTCCTTCATCAAGTTTTTCATCTATTGTCGATGAAGTTTTTGAAATTGAAAAGGGGACATCTGCAACTACTTTTCCTTCTCAGAACTTTTCTTCATTCAGTTCATCTCCTGCTTCTCATATGGGTTCTGTCCCCATGAATCTTCATACTGTAAAAGCTGGAACAGCCTCTCCAAAGTGGGAAGTGGGTTTGCAGGCCTCACAGCTTAATAATGTTGCAAAAGTATCAAGTCCAGCTTCTCATTATGGTGGTTCATTATATCCATCAAGTGGTCTGAAGGGCTCACATCATTCTAGTTCTTTTGGTTCGTTATCTTCTGCCACAGGAAGAAGCACGGCTGCAAAGAAGCTGTCAGCTTCTAAATCTGATCAGGATCTGGCTTCTCTTAGATCCCCTCATTCAGTTGAAATTGGAGCATTGGATGAAGATCAGTTGAGATTGCTAAATGATGCCTCAAAGGATGCACTGTCAGCAAGTAGGTCATCTCGACTGTTATCCCCGCCCAGACCAAATGTTCCTCGAGTCTCTGCACAAGGTGCAAAGCCTAATGGACCTAGAAGCTCATCATCTGCTAGGTTTGCTGGATCAAGCCCTTTGTCTTCACCTCCAATATCCCAGGCAGCAGAAACTACATTTTCTCATGGTACTTCTCATGATGCTACCAAACACGACAAAAATCCACGAAAGCGTACAGTTTCAGATATGTTGAGTTTGATTCCATCTCTGCAAGGTATAGAGGCAGTTGCAGGATTTGGTAAGAGAAGGAAAACTTCTGATGTGGCTTATACACAGCAGCCTTCATCACAGGTTCTTATGTCTTCAGAAATGATCTCTAAATCTGAAACATACAGTTATGGGAACCTTATAGCTGAAGCAAATAAAGGGAATGCACCTTCTAGTATCTATGTTTCTGCTCTTCTTCATGTGGTGAGGCATTCTTCACTTTGTATTAAACATGCCAGATTAACTAGCCAGATGGAGGAACTGGACATTCCATATGTTGAAGAAGTAGGTCTAAGAAATGCATCCTCAAACATATGGTTCCGACTTCCATCTGCCCGGGGTGATTCATGGCGACATATATGCTTGCGACTTGGAAGGCCTGGAAGCATGTACTGGGATGTCAAAATTAATGACCAACACTTCAGAGATTTGTGGGAACTTCAGAAGGGAAGTAATAGTACACCTTGGGGCACTGGTGTACGCATAGCGAACACATCTGATGTGGATTCTCATATTCGTTATGATCCAGATGGTGTTGTTCTGAGTTATCAGTCTGTTGAGGCGGATAGTATTAAGAAGTTGGTCGCAGATATAAGGAGGCTATCTAATGCTAGAATGTTTTCCCTTGGGATGAGAAAATTGCTTGGGGTTAGAGCAGATGAGAAACCTGAAGATGGCGGTGCTAACCCTGATGTTAAAACAGCAGTTGGAGTCAAAAGTGCTGTTGAAGCTGCTGATAAGTTGTCAGAGCAGATGAGAAGGTCTTTCAAAATTGAAGCAGTGGGATTATTGAGTTTGTGGTTTTGCTTTGGATCAGGCGTCTTAGCTCGCTTTGTTGTGGAGTGGGAATCAGGTAAAGAAGGTTGCACAATGCATGTGTCCCCTGACCAACTTTGGCCTCACACAAAGTTTTTGGAAGATTTTATAGACGGTGCTGAAGTTGCATCCCTCTTGGACTGCATTCGGCTCACTGCAGGACCTTTGCATGCCCTTGCCGCTGCAACTCGACCTGCTCGAGCTAGTCCTGCTCCAGGAGTCCCTGGGGTATCTGCACCTATTTCTTCTATGTCAAAACAGTCGGGATACATACCATCTCAGGGACTTTTGCCAAGTAGTTCAACTTCAAATGTTAATCAGGCTGCTTCCGCTCCAGCAGGAAACACTGCTGCATCTGCTGCTAGCTCTCTGGGGAATCATGGCCTCCATGGGGCTGGAATGTTAGTAAATCCAGGGAGAGGTGGCCCTGGCATTGTTCCGAGCTCGCTGTTGCCCATTGATGTTTCTGTTGTTTTACGTGGTCCATATTGGATACGCATAATATATCGCAAGCGTTTTGCAGTTGACATGCGATGCTTTGCTGGAGATCAAGTTTGGTTGCAGCCAGCAACACCACCTGCAACACCACCCAGGGGGGGATCTTCTGTTGGAGGGTCATTACCATGTCCACAGTTCAGGCCTTTCATTATGGAGCATGTTGCCCAAGAACTAAATGGATTGGATTCTGGTTTCACTGGTGGTCAACAAGCAGTTGGCCTGGCAAATTCAAACAATCCAAACTCAAATTCAGGTCCGCAGCTTTCAGCAAATGGAAATAGAGTTAACCTCCCTACTTCTGCAGCAATGTCTAGGGCAGCAAATCAGGTAGCTGGTTTAAACCGTGTTGGAAATGCCCTTCCAGGATCACCAAATTTAGCTGTTGTGAGCTCAGGATTGCCAATACGTAGGTCACCTGGTAGTGGTGTTCCTGCACATGTTAGGGGGGAACTGAATACAGCCATTATTGGCCTTGGTGATGATGGAGGATATGGAGGTGGATGGGTTCCTGTTGTTGCTCTTAAAAAGGTTTTAAGGGGTATTCTCAAGTATCTTGGAGTTCTATGGTTATTTGCCCAGTTGCCAGATCTTTTGAAAGAGATCTTGGGATCAATTTTGAAGGACAACGAAGGTGCACTTTTGAACTTGGACCAGGAACAGCCTGCCTTGCGTTTCTTTGTTGGGGGCTATGTGTTTGCTGTAAGTGTCCACAGAGTTCAACTTCTTCTCCAGGTTCTTAGTGTGAAGCGCTTCCATCATCAACAGCAGCAACAACAGCAACAAAACAATGCTAATGCCCAAGAGGAACTATCACAATCTGAAATAAGTGAGATATGTGACTACTTCAGTCGCCGTGTCGCATCAGAGCCCTATGATGCCTCGCGTGTTGCATCGTTCATTACTCTTCTCACGCTACCCATATCTGTTTTACGAGAATTCCTGAAATTAATAGCATGGAAAAAGGGATTAGCCCAGACTCAAGGTGGAGATATAGCTCCTGCACAGAAACCACGAATCGAGTTATGCCTTGAAAATCATTCCGGCGTAAATGCTGATGATAGTTCTGAAAGTCCATCTACAACTAAAAGCAATATCCACTATGATCGACCTCATAACTCTGTGGATTTTGCACTGACCGTTGTACTTGATCCTGCCCATATACCTCATATTAATGCTGCTGGTGGTGCTGCTTGGCTGCCCTATTGCGTCTCAGTGAGATTAAGATATTCATTTGGTGAAGACCCTAACGTGTCCTTTCTTGGCATGGAAGGAAGCCATGGAGGACGTGCGTGCTGGTTGCGCCTTGATGACTGGGAGAAATGCAAGCAGAGGGTGGCTCGAACCGTGGAGGTTAGTGGGCGTTCACCAGCAGATGCCTCTCAAGGTAGGTTAAGAGCAGTGGCAGACAATGTACAAAGAGCACTCATATGTGCCTTCAAGGACTGA

Protein:   MAELGQQTVEFSTLVSRTAEESFLSLKELVEKSKSSDQSDTEKKINLLKYIVKTQQRMLRLNVLAKWCQQVPLIQYCQQLTSTLSSHDTCFTQAADSLFFMHEGLQQARAPVYDVPSAVEVLLTGSYERLPKCIEDVGMQSSLNEDQQKPALRKLDTLVRSKLLEVSMPKEITEVKVSNGTALLRVDGEFKVLVTLGYRGHLSLWRILHLELLVGERSGLVKLEEMRRHVLGDDLERRMSAAENPFNILYSVLHELCVALVMDTVIRQVQALRQGRWKDAIRFELISDGGSGSSTQVNQDNESDSAGLRTPGLKLVYWLDFDKNSGPSDSGSCPYIKIEPGPDLQIKCHHSTFLIDPLTGKEARFSLDQSCIDVEKLLLRAISCHKYTRLLEIQKELVKNVQICRAASDVVLHSPADDSDSENKKKDAKLDNKEHEGQEVLRVRAYGSSFFTLGINIRNGRFLLQSSQNILAPSALLECEEALNQETMNAVEVFTSLRNKSVLHLFAAIGRFLGLEVYEHGFAAMKVPKNIVSGSAVLVLGFPDCESSYFLLMELDKDFKPLFKLLETEPDPSGKGQSFYDLNNVLRIKKIDINQMQMLEDETNLSIVDWGKLLTFLPNIVGPNQTSEHGLLSEFNLDGSMQIAGGPSSSFSSIVDEVFEIEKGTSATTFPSQNFSSFSSSPASHMGSVPMNLHTVKAGTASPKWEVGLQASQLNNVAKVSSPASHYGGSLYPSSGLKGSHHSSSFGSLSSATGRSTAAKKLSASKSDQDLASLRSPHSVEIGALDEDQLRLLNDASKDALSASRSSRLLSPPRPNVPRVSAQGAKPNGPRSSSSARFAGSSPLSSPPISQAAETTFSHGTSHDATKHDKNPRKRTVSDMLSLIPSLQGIEAVAGFGKRRKTSDVAYTQQPSSQVLMSSEMISKSETYSYGNLIAEANKGNAPSSIYVSALLHVVRHSSLCIKHARLTSQMEELDIPYVEEVGLRNASSNIWFRLPSARGDSWRHICLRLGRPGSMYWDVKINDQHFRDLWELQKGSNSTPWGTGVRIANTSDVDSHIRYDPDGVVLSYQSVEADSIKKLVADIRRLSNARMFSLGMRKLLGVRADEKPEDGGANPDVKTAVGVKSAVEAADKLSEQMRRSFKIEAVGLLSLWFCFGSGVLARFVVEWESGKEGCTMHVSPDQLWPHTKFLEDFIDGAEVASLLDCIRLTAGPLHALAAATRPARASPAPGVPGVSAPISSMSKQSGYIPSQGLLPSSSTSNVNQAASAPAGNTAASAASSLGNHGLHGAGMLVNPGRGGPGIVPSSLLPIDVSVVLRGPYWIRIIYRKRFAVDMRCFAGDQVWLQPATPPATPPRGGSSVGGSLPCPQFRPFIMEHVAQELNGLDSGFTGGQQAVGLANSNNPNSNSGPQLSANGNRVNLPTSAAMSRAANQVAGLNRVGNALPGSPNLAVVSSGLPIRRSPGSGVPAHVRGELNTAIIGLGDDGGYGGGWVPVVALKKVLRGILKYLGVLWLFAQLPDLLKEILGSILKDNEGALLNLDQEQPALRFFVGGYVFAVSVHRVQLLLQVLSVKRFHHQQQQQQQQNNANAQEELSQSEISEICDYFSRRVASEPYDASRVASFITLLTLPISVLREFLKLIAWKKGLAQTQGGDIAPAQKPRIELCLENHSGVNADDSSESPSTTKSNIHYDRPHNSVDFALTVVLDPAHIPHINAAGGAAWLPYCVSVRLRYSFGEDPNVSFLGMEGSHGGRACWLRLDDWEKCKQRVARTVEVSGRSPADASQGRLRAVADNVQRALICAFKD